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Emerging trends in computational biology, bioinformatics, and systems biology : algorithms and software tools / [edited by] Quoc Nam Tran, Hamid Arabnia
Emerging trends in computational biology, bioinformatics, and systems biology : algorithms and software tools / [edited by] Quoc Nam Tran, Hamid Arabnia
Estensione 1 online resource : illustrations
Disciplina 570.285
Accesso persona Tran, Quoc-Nam, editor
Arabnia, Hamid, editor
Accesso convegno BIOCOMP (Conference) (2014 : Las Vegas, Nev.)
BIOCOMP (Conference) (2013 : Las Vegas, Nev.)
Genere/Forma Electronic books
ISBN 9780128026465
9780128025086
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Record Nr. YALE-13747884
Materiale a stampa
Lo trovi qui: Yale University
Mathematical Oncology 2013 [electronic resource] / edited by Alberto d'Onofrio, Alberto Gandolfi
Mathematical Oncology 2013 [electronic resource] / edited by Alberto d'Onofrio, Alberto Gandolfi
Estensione 1 online resource (X, 334 p.) 96 illus., 78 illus. in color.
Disciplina 570.285
Accesso persona D'Onofrio, Alberto
Gandolfi, Alberto
Accesso ente SpringerLink (Online service)
ISBN 9781493904587
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Part I: Cancer Onset and Early Growth -- Modeling spatial effects in carcinogenesis: stochastic and deterministic reaction-diffusion -- Conservation law in cancer modeling -- Avascular tumor growth modeling: physical insight in skin cancer -- Part II: Tumor and Inter-Cellular Interactions -- A cell population model structured by cell age incorporating cell-cell adhesion -- A general framework for multiscale modeling of tumor–immune system interactions -- The power of the tumor microenvironment: a systemic approach for a systemic disease -- Part III: Anti-Tumor Therapies -- Modeling immune-mediated tumor growth and treatment -- Hybrid multiscale approach in cancer modelling and treatment prediction -- Deterministic mathematical modelling for cancer chronotherapeutics: cell population dynamics and treatment optimization -- Tumor Microenvironment and Anticancer Therapies: An Optimal Control Approach.
Record Nr. YALE-13771744
Materiale a stampa
Lo trovi qui: Yale University
Targeted Cancer Treatment in Silico [electronic resource] : Small Molecule Inhibitors and Oncolytic Viruses / by Natalia L. Komarova, Dominik Wodarz
Targeted Cancer Treatment in Silico [electronic resource] : Small Molecule Inhibitors and Oncolytic Viruses / by Natalia L. Komarova, Dominik Wodarz
Creatore [Komarova, Natalia L.]
Estensione 1 online resource (XV, 227 p.) 71 illus., 26 illus. in color.
Disciplina 570.285
Accesso persona Wodarz, Dominik
Accesso ente SpringerLink (Online service)
ISBN 9781461483014
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Background and Scope of the Book -- Part I Treatment of Cancer with Small Molecule Inhibitors -- An Introduction to Small Molecule Inhibitors and Chronic Myeloid Leukemia -- Basic Dynamics of Chronic Myeloid Leukemia During Imatinib Treatment -- Stochastic Modeling of Cellular Growth, Treatment, and Resistance Generation -- Evolutionary Dynamics of Drug Resistant Mutants in Targeted Treatment of CML -- Effect of Cellular Quiescence on the Evolution of Drug Resistance in CML -- Combination Therapies: Short term versus Long term Strategies -- Cross Resistance: Treatment and Modeling -- Mathematical Modeling of Cyclic Cancer Treatments -- Part II Treatment of Cancer with Oncolytic Viruses -- Introduction to Oncolytic Viruses -- Basic Dynamics of Oncolytic Viruses -- Mitotic Virus Transmission and Immune Responses -- Axiomatic Approaches to Oncolytic Virus Modeling -- Spatial Oncolytic Virus Dynamics -- Oncolytic Viruses and the Eradication of Drug-resistant Tumor Cells.
Record Nr. YALE-13771472
[Komarova, Natalia L.]  
Materiale a stampa
Lo trovi qui: Yale University
Data Mining for Systems Biology [electronic resource] : Methods and Protocols / edited by Hiroshi Mamitsuka
Data Mining for Systems Biology [electronic resource] : Methods and Protocols / edited by Hiroshi Mamitsuka
Edizione [2nd ed. 2018.]
Estensione 1 online resource (XI, 243 p.) 95 illus., 86 illus. in color.
Disciplina 570.285
Accesso persona Mamitsuka, Hiroshi.editor.
Accesso ente SpringerLink (Online service)
ISBN 9781493985616
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Identifying Bacterial Strains from Sequencing Data -- MetaVW: Large-Scale Machine Learning for Metagenomics Sequence Classification -- Online Interactive Microbial Classification and Geospatial Distributional Analysis Using BioAtlas -- Generative Models for Quantification of DNA Modifications -- DiMmer: Discovery of Differentially Methylated Regions in Epigenome-Wide Association Study (EWAS) Data -- Implementing a Transcription Factor Interaction Prediction System Using the GenoMetric Query Language -- Multiple Testing Tool to Detect Combinatorial Effects in Biology -- SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining -- Computing and Visualizing Gene Function Similarity and Coherence with NaviGO -- Analyzing Glycan Binding Profiles Using Weighted Multiple Alignment of Trees -- Analysis of Fluxomic Experiments with Principal Metabolic Flux Mode Analysis -- Analyzing Tandem Mass Spectra Using the DRIP Toolkit: Training, Searching, and Post-Processing -- Sparse Modeling to Analyze Drug-Target Interaction Networks -- DrugE-Rank: Predicting Drug-Target Interactions by Learning to Rank -- MeSHLabeler and DeepMeSH: Recent Progress in Large-Scale MeSH Indexing -- Disease Gene Classification with Metagraph Representations -- Inferring Antimicrobial Resistance from Pathogen Genomes in KEGG.
Record Nr. YALE-13713018
Materiale a stampa
Lo trovi qui: Yale University
In Silico Systems Biology [electronic resource] / edited by Maria Victoria Schneider
In Silico Systems Biology [electronic resource] / edited by Maria Victoria Schneider
Estensione 1 online resource (X, 313 p.) 88 illus., 70 illus. in color.
Disciplina 570.285
Accesso persona Schneider, Maria Victoria.editor.
Accesso ente SpringerLink (Online service)
ISBN 9781627034500
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Defining Systems Biology: A Brief Overview of the Term and Field -- Approaches to Modelling Gene Regulatory Networks - A Gentle Introduction -- Integration of Genomic Information with Biological Networks using Cytoscape -- Visualization and Analysis of Biological Networks -- Modeling Signaling Networks with Different Formalisms:  A Preview -- From a Biological Hypothesis to the  Construction of a Mathematical Model -- Practical use of BiNoM, a Biological Network Manager Software -- Using Chemical Kinetics to Model Biochemical Pathways -- Simulation of Stochastic KineticModels -- BioModels Database: A Repository of Mathematical Models of Biological Processes -- Supporting SBML as a Model Exchange Format in Software Applications -- Controlled Annotations for Systems Biology -- Bayesian Approaches for Mechanistic Ion Channel Modelling -- Building Models using Reactome Pathways as Templates -- Uniform Curation Protocol of Metazoan Signaling Pathways to Predict Novel Signaling Components -- Bioinformatics Workflows and Web-services in Systems Biology Made Easy for Experimentalists.
Record Nr. YALE-13712195
Materiale a stampa
Lo trovi qui: Yale University
Bioinformatics and the Cell [electronic resource] : Modern Computational Approaches in Genomics, Proteomics and Transcriptomics / by Xuhua Xia.
Bioinformatics and the Cell [electronic resource] : Modern Computational Approaches in Genomics, Proteomics and Transcriptomics / by Xuhua Xia.
Creatore [Xia, Xuhua]
Edizione [2nd ed. 2018.]
Estensione XIII, 489 p. 122 illus., 59 illus. in color : online resource.
Disciplina 570.285
Accesso ente SpringerLink (Online service)
ISBN 9783319906843
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Blast and Fasta -- Sequence alignment -- Contig assembly -- DNA replication and viral evolution -- Gene and motif prediction -- Hidden Markov Models -- Gibbs Sampler -- Bioinformatics and vertebrate mitochondria -- Characterizing translation efficiency -- Protein isoelectric point -- Bioinformatics and Two-Dimensional Protein Separation -- Self-Organizing Map and other clustering Algorithms -- Molecular Phylogenetics -- Fundamentals of Proteomics.
Record Nr. YALE-13686315
[Xia, Xuhua]  
Materiale a stampa
Lo trovi qui: Yale University
Computational methods in systems biology [electronic resource] : 10th International Conference, CMSB 2012, London, UK, October 3-5, 2012. Proceedings / David Gilbert, Monika Heiner (eds.).
Computational methods in systems biology [electronic resource] : 10th International Conference, CMSB 2012, London, UK, October 3-5, 2012. Proceedings / David Gilbert, Monika Heiner (eds.).
Creatore [CMSB 2012 (2012 : London, England)]
Estensione 1 online resource.
Disciplina 570.285
Accesso persona Gilbert, David, Dr
Heiner, Monika, 1954-
Genere/Forma Electronic books
Soggetto non controllato Computer science
Software engineering
Computer simulation
Bioinformatics
Computational Biology/Bioinformatics
Computation by Abstract Devices
Computer Appl. in Life Sciences
Symbolic and Algebraic Manipulation
ISBN 9783642336362 (electronic bk.)
3642336361 (electronic bk.)
9783642336355
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Differential and Integral Views of Gene-Phenotype Relations: A Systems Biological Insight / Denis Noble -- Resolving the Three-Dimensional Histology of the Heart / Matthew Gibb, Rebecca A. B. Burton, Christian Bollensdorff, Carlos Afonso and Tahir Mansoori, et al. -- Bimodal Protein Distributions in Heterogeneous Oscillating Systems / Maciej Dobrzyński, Dirk Fey, Lan K. Nguyen and Boris N. Kholodenko -- Expressive Statistical Model Checking of Genetic Networks with Delayed Stochastic Dynamics / Paolo Ballarini, Jarno Mäkelä and Andre S. Ribeiro -- Symmetry-Based Model Reduction for Approximate Stochastic Analysis / Kirill Batmanov, Celine Kuttler, Francois Lemaire, Cédric Lhoussaine and Cristian Versari -- Detection of Multi-clustered Genes and Community Structure for the Plant Pathogenic Fungus Fusarium graminearum / Laura Bennett, Artem Lysenko, Lazaros G. Papageorgiou, Martin Urban and Kim Hammond-Kosack, et al. -- Predicting Phenotype from Genotype through Automatically Composed Petri Nets / Mary Ann Blätke, Monika Heiner and Wolfgang Marwan --
A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation / Alfonso Carta, Madalena Chaves and Jean-Luc Gouzé -- Multi-objective Optimisation, Sensitivity and Robustness Analysis in FBA Modelling / Jole Costanza, Giovanni Carapezza, Claudio Angione, Pietro Liò and Giuseppe Nicosia -- Analysis of Modular Organisation of Interaction Networks Based on Asymptotic Dynamics / Franck Delaplace, Hanna Klaudel, Tarek Melliti and Sylvain Sené -- Concretizing the Process Hitting into Biological Regulatory Networks / Maxime Folschette, Loïc Paulevé, Katsumi Inoue, Morgan Magnin and Olivier Roux -- Abstraction of Graph-Based Models of Bio-molecular Reaction Systems for Efficient Simulation / Ibuki Kawamata, Nathanael Aubert, Masahiro Hamano and Masami Hagiya -- Parameter Identification and Model Ranking of Thomas Networks / Hannes Klarner, Adam Streck, David Šafránek, Juraj Kolčák and Heike Siebert --
Investigating Co-infection Dynamics through Evolution of Bio-PEPA Model Parameters: A Combined Process Algebra and Evolutionary Computing Approach / David Marco, Erin Scott, David Cairns, Andrea Graham and Judi Allen, et al. -- Population Dynamics P Systems on CUDA / Miguel A. Martínez-del-Amor, Ignacio Pérez-Hurtado, Adolfo Gastalver-Rubio, Anne C. Elster and Mario J. Pérez-Jiménez -- Approximate Bisimulations for Sodium Channel Dynamics / Abhishek Murthy, Md. Ariful Islam, Ezio Bartocci, Elizabeth M. Cherry and Flavio H. Fenton, et al. -- Efficient Handling of Large Signalling-Regulatory Networks by Focusing on Their Core Control / Aurélien Naldi, Pedro T. Monteiro and Claudine Chaouiya -- Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks / Ilya Potapov, Jarno Mäkelä, Olli Yli-Harja and Andre Ribeiro -- Simulating Insulin Infusion Pump Risks by In-Silico Modeling of the Insulin-Glucose Regulatory System / Sriram Sankaranarayanan and Georgios Fainekos --
Revisiting the Training of Logic Models of Protein Signaling Networks with ASP / Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele and Niels Grabe, et al. -- JAK-STAT Signalling as Example for a Database-Supported Modular Modelling Concept / Mary Ann Blätke, Anna Dittrich, Monika Heiner, Fred Schaper and Wolfgang Marwan -- ManyCell: A Multiscale Simulator for Cellular Systems / Joseph O. Dada and Pedro Mendes -- Inferring Reaction Models from ODEs / François Fages, Steven Gay and Sylvain Soliman -- Modelling Trafficking of Proteins within the Mammalian Cell Using Bio-PEPA / Vashti Galpin -- Models of Tet-On System with Epigenetic Effects / Russ Harmer, Jean Krivine, Élise Laruelle, Cédric Lhoussaine and Guillaume Madelaine, et al. -- GeneFuncster: A Web Tool for Gene Functional Enrichment Analysis and Visualisation / Asta Laiho, András Király and Attila Gyenesei -- Effects of Molecular Noise on the Multistability in a Synthetic Genetic Oscillator / Ilya Potapov and Evgenii Volkov -- Towards an Ontology of Biomodelling / Larisa Soldatova, Qian Gao and David Gilbert.
Record Nr. UPENN-9960101013503681
[CMSB 2012 (2012 : London, England)]  
Materiale a stampa
Lo trovi qui: University of Pennsylvania
Research in computational molecular biology [electronic resource] : 18th Annual International Conference, RECOMB 2014, Pittsburgh, PA, USA, April 2-5, 2014 : proceedings / Roded Sharan (ed.).
Research in computational molecular biology [electronic resource] : 18th Annual International Conference, RECOMB 2014, Pittsburgh, PA, USA, April 2-5, 2014 : proceedings / Roded Sharan (ed.).
Creatore [RECOMB (Conference) (18th : 2014 : Pittsburgh, Pa.)]
Estensione 1 online resource (xvi, 464 pages) : illustrations
Disciplina 570.285
Accesso persona Sharan, Roded, editor
Genere/Forma Electronic books
ISBN 9783319052694 (electronic bk.)
3319052691 (electronic bk.)
9783319052687
3319052683
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Record Nr. UPENN-9962106983503681
[RECOMB (Conference) (18th : 2014 : Pittsburgh, Pa.)]  
Materiale a stampa
Lo trovi qui: University of Pennsylvania
Algorithms for Computational Biology [electronic resource] : Third International Conference, AlCoB 2016, Trujillo, Spain, June 21-22, 2016, Proceedings / edited by María Botón-Fernández, Carlos Martín-Vide, Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez
Algorithms for Computational Biology [electronic resource] : Third International Conference, AlCoB 2016, Trujillo, Spain, June 21-22, 2016, Proceedings / edited by María Botón-Fernández, Carlos Martín-Vide, Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez
Estensione X, 183 p. 46 illus : online resource.
Disciplina 570.285
Accesso persona Botón-Fernandez, María
Martín Vide, Carlos
Santander-Jiménez, Sergio
Vega-Rodríguez, Miguel A.
Accesso ente SpringerLink (Online service)
ISBN 9783319388274
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto The Trees in the Peaks -- Relating Bisimulations with Attractors in Boolean Network Models -- Neural Network Simulation of Feeding Adaptations of Daphnia -- Generating the Logicome of a Biological Network -- Counting, Generating and Sampling Tree Alignments -- A New Multi-Objective Approach for Molecular Docking Based on RMSD and Binding Energy -- Gibbs/MCMC Sampling for Multiple RNA Interaction with Sub-optimal Solutions -- Accumulated Coalescence Rank and Excess Gene Count for Species Tree Inference -- Bootstrapping Algorithms for Gene Duplication and Speciation Events -- Robustness of the Parsimonious Reconciliation Method in Cophylogeny -- Sorting with Forbidden Intermediates -- Evaluation and Improvement of Fast Algorithms for Exact Matching on Genome Sequences -- Identification of Variant Compositions in Related Strains without Reference -- New Error Tolerant Method for Search of Long Repeats in DNA Sequences.
Record Nr. YALE-12877401
Materiale a stampa
Lo trovi qui: Yale University
Computational Intelligence Methods for Bioinformatics and Biostatistics [electronic resource] : 12th International Meeting, CIBB 2015, Naples, Italy, September 10-12, 2015, Revised Selected Papers / edited by Claudia Angelini, Paola MV Rancoita, Stefano Rovetta
Computational Intelligence Methods for Bioinformatics and Biostatistics [electronic resource] : 12th International Meeting, CIBB 2015, Naples, Italy, September 10-12, 2015, Revised Selected Papers / edited by Claudia Angelini, Paola MV Rancoita, Stefano Rovetta
Estensione XII, 286 p. 89 illus : online resource.
Disciplina 570.285
Accesso persona Angelini, Claudia
Rancoita, Paola MV.
Rovetta, Stefano
Accesso ente SpringerLink (Online service)
ISBN 9783319443324
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Computational techniques in bioinformatics -- Systems biology and medical informatics -- Cutting edge methodologies and accelerate life science discoveries -- Novel challenges with an high impact on molecular biology and translational medicine.
Record Nr. YALE-12885352
Materiale a stampa
Lo trovi qui: Yale University